Prof. Jean-Christophe Olivo-Marin Profile

Prof. Jean-Christophe Olivo-Marin

Group Leader at Institut Pasteur

SPIE Involvement:

Author

Publications (16)

SPIE Journal Paper | 1 June 2023 Open Access

Open Access

Automatic diagnosis and classification of breast surgical samples with dynamic full-field OCT and machine learning

Jules Scholler, Diana Mandache, Marie Christine Mathieu, Aïcha Ben Lakhdar, Marie Darche, Tual Monfort, Claude Boccara, Jean-Christophe Olivo-Marin, Kate Grieve, Vannary Meas-Yedid, Emilie Benoit a la Guillaume, Olivier Thouvenin

JMI, Vol. 10, Issue 03, 034504, (June 2023) https://doi.org/10.1117/12.10.1117/1.JMI.10.3.034504

KEYWORDS: Tumors, Image segmentation, Biological samples, Breast, Education and training, Machine learning, Histopathology, Optical coherence tomography, Tissues, Cancer

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Proceedings Article | 24 August 2017 Paper

Paper

A sparsity-based simplification method for segmentation of spectral-domain optical coherence tomography images

William Meiniel, Yu Gan, Jean-Christophe Olivo-Marin, Elsa Angelini

Proceedings Volume 10394, 1039406 (2017) https://doi.org/10.1117/12.2274126

KEYWORDS: Image segmentation, Optical coherence tomography, Image denoising, Compressed sensing

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Proceedings Article | 11 September 2015 Paper

Paper

Image denoising by adaptive Compressed Sensing reconstructions and fusions

William Meiniel, Elsa Angelini, Jean-Christophe Olivo-Marin

Proceedings Volume 9597, 95970X (2015) https://doi.org/10.1117/12.2188648

KEYWORDS: Image fusion, Denoising, Reconstruction algorithms, Image processing, Compressed sensing, Fourier transforms, Image filtering, Image quality, Digital filtering, Image denoising

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Proceedings Article | 26 September 2013 Paper

Paper

Biological video reconstruction using linear or non-linear Fourier measurements

Yoann Le Montagner, Elsa Angelini, Jean-Christophe Olivo-Marin

Proceedings Volume 8858, 885818 (2013) https://doi.org/10.1117/12.2024282

KEYWORDS: Video, Phase retrieval, Video microscopy, Fourier transforms, Radon, Compressed sensing, Video compression, Detection theory, Reconstruction algorithms, Interference (communication)

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Proceedings Article | 27 September 2011 Paper

Paper

Numerical evaluation of subsampling effects on image reconstruction in compressed sensing microscopy

Yoann Le Montagner, Elsa Angelini, Jean-Christophe Olivo-Marin

Proceedings Volume 8138, 81380H (2011) https://doi.org/10.1117/12.893291

KEYWORDS: Image restoration, Binary data, Compressed sensing, Microscopy, Transform theory, Image processing, Error analysis, Image filtering, Wavelets, Matrices

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Proceedings Article | 4 September 2009 Paper

Paper

Compressed sensing in biological microscopy

Marcio de Moraes Marim, Elsa Angelini, Jean-Christophe Olivo-Marin

Proceedings Volume 7446, 744605 (2009) https://doi.org/10.1117/12.826275

KEYWORDS: Signal to noise ratio, Denoising, Microscopy, Luminescence, Interference (communication), Image restoration, Image acquisition, Compressed sensing, Molecules, Process control

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Proceedings Article | 27 September 2007 Paper

Paper

Detection of curvilinear objects in biological noisy image using feature-adapted fast slant stack

Sylvain Berlemont, Aaron Bensimon, Jean-Christophe Olivo-Marin

Proceedings Volume 6701, 67010H (2007) https://doi.org/10.1117/12.733619

KEYWORDS: Transform theory, Image filtering, Fourier transforms, Sensors, Linear filtering, Image segmentation, Radon, Radon transform, Digital filtering, Microscopy

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Proceedings Article | 23 February 2006 Paper

Paper

A study of Gaussian approximations of fluorescence microscopy PSF models

Bo Zhang, Josiane Zerubia, Jean-Christophe Olivo-Marin

Proceedings Volume 6090, 60900K (2006) https://doi.org/10.1117/12.645650

KEYWORDS: Point spread functions, Microscopy, Luminescence, Confocal microscopy, 3D modeling, Data modeling, Objectives, Data processing, Expectation maximization algorithms, Deconvolution

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Proceedings Article | 9 July 2003 Paper

Paper

Biological cell tracking with implicit active contours: preventing object fusions

Marion Feral, Christophe Zimmer, Jean-Christophe Olivo-Marin

Proceedings Volume 4964, (2003) https://doi.org/10.1117/12.478002

KEYWORDS: Image segmentation, Modulation, Field emission displays, Image processing, Image fusion, MODIS, Microscopy, Interfaces, Biological research, Tumors

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Proceedings Article | 9 July 2003 Paper

Paper

Tracking fluroescent spots in biological video microscopy

Auguste Genovesio, Jean-Christophe Olivo-Marin

Proceedings Volume 4964, (2003) https://doi.org/10.1117/12.478040

KEYWORDS: Biological research, Video microscopy, Wavelets, Filtering (signal processing), Motion analysis, Image analysis, Image processing, Error analysis, Pathogens, Cell biology

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Proceedings Article | 2 November 2001 Paper

Paper

Active contours applied to the shape and motion analysis of amoeba

Christophe Zimmer, Vannary Meas-Yedid, Estelle Glory, Elisabeth Labruyere, Nancy Guillen, Jean-Christophe Olivo-Marin

Proceedings Volume 4476, (2001) https://doi.org/10.1117/12.447275

KEYWORDS: Image segmentation, Binary data, Shape analysis, Image processing, Image filtering, Motion analysis, Diffusion, Volume rendering, Phase contrast, Automatic tracking

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Proceedings Article | 17 May 1999 Paper

Paper

Analysis of moving biological objects in video microscopy sequences

Frederic Briquet-Laugier, Christian Boulin, Jean-Christophe Olivo-Marin

Proceedings Volume 3642, (1999) https://doi.org/10.1117/12.348414

KEYWORDS: Filtering (signal processing), Biological research, Video microscopy, Image filtering, Motion analysis, Electronic filtering, Microscopy, Phase contrast, Digital filtering, Image analysis

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Proceedings Article | 1 September 1995 Paper

Paper

Automatic registration of images by a wavelet-based multiresolution approach

Jean-Christophe Olivo-Marin, J. Deubler, Christian Boulin

Proceedings Volume 2569, (1995) https://doi.org/10.1117/12.217579

KEYWORDS: Wavelets, Image registration, Image processing, Wavelet transforms, Image resolution, Tomography, Reliability, Fast wavelet transforms, Image filtering, Signal to noise ratio

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Proceedings Article | 22 August 1995 Paper

Paper

Automatic detection of particles in immunolabelled images by wavelet-based selective reconstruction

Jean-Christophe Olivo-Marin

Proceedings Volume 2564, (1995) https://doi.org/10.1117/12.217413

KEYWORDS: Wavelets, Particles, Wavelet transforms, Metals, Discrete wavelet transforms, Image analysis, Tissues, Image filtering, Interference (communication), Convolution

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Proceedings Article | 22 October 1993 Paper

Paper

Image segmentation by wavelet-based automatic threshold selection

Jean-Christophe Olivo

Proceedings Volume 2094, (1993) https://doi.org/10.1117/12.157872

KEYWORDS: Image segmentation, Wavelet transforms, Wavelets, Smoothing, Image processing algorithms and systems, Image resolution, Digital filtering, Discrete wavelet transforms, Signal processing, Statistical analysis

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Proceedings Article | 19 May 1992 Paper

Paper

Nanometer-size metal particle analysis in microscopic biological images

Jean-Christophe Olivo-Marin

Proceedings Volume 1657, (1992) https://doi.org/10.1117/12.58359

KEYWORDS: Particles, Metals, Gold, Biological research, Image enhancement, Image processing, Image analysis, Tissues, Digital filtering, Image filtering

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Showing 5 of 16 publications

Conference Committee Involvement (7)

Wavelets and Sparsity XVIII

13 August 2019 | San Diego, California, United States

Wavelets and Sparsity XVII

6 August 2017 | San Diego, California, United States

Wavelets and Sparsity XVI

10 August 2015 | San Diego, California, United States

Wavelets and Sparsity XV

26 August 2013 | San Diego, California, United States

Wavelets and Sparsity XIV

21 August 2011 | San Diego, California, United States

Showing 5 of 7 Conference Committees

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