Web infrastructure for data management, storage and computation

Serge Brosset; Maxime Dumont; Lucia Cevidanes; Reza Soroushmehr; Jonas Bianchi; Marcela L. Gurgel; Romain Deleat-besson; Celia Le; Antonio Ruellas; Marilia Yatabe; Liliane Rosas; Joao Goncalves; Kayvan Najarian; Jonathan Gryak; Beatriz Paniagua; Martin Styner; Juan Carlos Prieto

doi:10.1117/12.2582283

14 February 2021 Web infrastructure for data management, storage and computation

Serge Brosset, Maxime Dumont, Lucia Cevidanes, Reza Soroushmehr, Jonas Bianchi, Marcela L. Gurgel, Romain Deleat-besson, Celia Le, Antonio Ruellas, Marilia Yatabe, Liliane Rosas, Joao Goncalves, Kayvan Najarian, Jonathan Gryak, Beatriz Paniagua, Martin Styner, Juan Carlos Prieto

Author Affiliations +

Proceedings Volume 11600, Medical Imaging 2021: Biomedical Applications in Molecular, Structural, and Functional Imaging; 116001N (2021) https://doi.org/10.1117/12.2582283
Event: SPIE Medical Imaging, 2021, Online Only

Conference Poster

Abstract

The Data Storage for Computation and Integration (DSCI) proposes management innovations for web-based secure data storage, algorithms deployment, and task execution. Its architecture allows uploading, browsing, sharing, and task execution in remote computing grids. Here, we demonstrate the DSCI implementation and the deployment of Image processing tools (TMJSeg), machine learning algorithms (MandSeg, DentalModelSeg), and advanced statistical packages (Multivariate Functional Shape Data Analysis, MFSDA), with data transfer and task execution handled by the clusterpost plug-in. Due to its comprehensive web-based design, local software installation is no longer required. The DSCI aims to enable and maintain distributed computing and collaboration environment across multi-site clinical centers for the data processing of multisource features such as clinical, biological markers, volumetric images, and 3D surface models.

Conference Presentation

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Serge Brosset, Maxime Dumont, Lucia Cevidanes, Reza Soroushmehr, Jonas Bianchi, Marcela L. Gurgel, Romain Deleat-besson, Celia Le, Antonio Ruellas, Marilia Yatabe, Liliane Rosas, Joao Goncalves, Kayvan Najarian, Jonathan Gryak, Beatriz Paniagua, Martin Styner, and Juan Carlos Prieto "Web infrastructure for data management, storage and computation", Proc. SPIE 11600, Medical Imaging 2021: Biomedical Applications in Molecular, Structural, and Functional Imaging, 116001N (14 February 2021); https://doi.org/10.1117/12.2582283

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