Paper
20 April 2021 Relationship between number of annotations and accuracy in segmentation of the erector spinae muscle using Bayesian U-Net in torso CT images
Author Affiliations +
Proceedings Volume 11792, International Forum on Medical Imaging in Asia 2021; 1179207 (2021) https://doi.org/10.1117/12.2590780
Event: International Forum on Medical Imaging in Asia 2021, 2021, Taipei, Taiwan
Abstract
Supervised learning for image segmentation requires annotated images. However, image annotation has the problem that it is time-consuming. This problem is particularly significant in the erector spinae muscle segmentation due to the large size of the muscle. Therefore, this study considers the relationship between the number of annotated images used for training and segmentation accuracy of the erector spinae muscle in torso CT images. We use Bayesian U-Net, which has shown high accuracy in thigh muscle segmentation, for the segmentation of the erector spinae muscle. In the network training, we limit the number of slices for each case and the number of cases to 100%, 50%, 25%, and 10%. In the experiment, we use 30 torso CT images, including 6 cases for the test dataset. Experimental results are evaluated by the mean Dice value of the test dataset. Using 100% of the slices per case, the segmentation accuracy with 100%, 50%, 25%, and 10% of the cases was 0.934, 0.927, 0.926, and 0.890, respectively. On the other hand, using 100% of the cases, the segmentation accuracy with 100%, 50%, 25%, and 10% of the slices per case was 0.934, 0.934, 0.933, and 0.931, respectively. Furthermore, the segmentation accuracy with 100% of the cases and 10% of the slices per case was higher than that of the previous method. We showed that it is feasible to achieve high segmentation accuracy with a limited number of annotated images by selecting several slices from a limited number of cases for training.
© (2021) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.
Yuichi Wakamatsu, Naoki Kamiya, Xiangrong Zhou, Takeshi Hara, and Hiroshi Fujita "Relationship between number of annotations and accuracy in segmentation of the erector spinae muscle using Bayesian U-Net in torso CT images", Proc. SPIE 11792, International Forum on Medical Imaging in Asia 2021, 1179207 (20 April 2021); https://doi.org/10.1117/12.2590780
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