Poster + Paper
6 April 2023 Effect of color-normalization on deep learning segmentation models for tumor-infiltrating lymphocytes scoring using breast cancer histopathology images
Author Affiliations +
Conference Poster
Abstract
Studies have shown that the increased presence of tumor-infiltrating lymphocytes (TILs) is associated with better long-term clinical outcomes and survival, which makes TILs a potentially useful quantitative biomarker. In clinics, pathologists’ visual assessment of TILs in biopsies and surgical resections result in a quantitative score (TILs-score). The Tumor-infiltrating lymphocytes in breast cancer (TiGER) challenge is the first public challenge on automated TILs-scoring algorithms using whole slide images of hematoxylin and eosin-stained (H&E) slides of human epidermal growth factor receptor-2 positive (HER2+) and triple-negative breast cancer (TNBC) patients. We participated in the TiGER challenge and developed algorithms for tumor-stroma segmentation, TILs cell detection, and TILs-scoring. The whole slide images in this challenge are from three sources, each with apparent color variations. We hypothesized that color-normalization may improve the cross-source generalizability of our deep learning models. Here, we expand our initial work by implementing a color-normalization technique and investigate its effect on the performance of our segmentation model. We compare the segmentation performance before and after color-normalization by cross validating the models on the three datasets. Our results show a substantial increase in the performance of the segmentation model after color-normalization when trained and tested on different sources. This might potentially improve the model’s generalizability and robustness when applied to the external sequestered test set from the TiGER challenge.
© (2023) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.
Arian Arab, Victor Garcia, Shuyue Guan, Brandon D. Gallas, Berkman Sahiner, Nicholas Petrick, and Weijie Chen "Effect of color-normalization on deep learning segmentation models for tumor-infiltrating lymphocytes scoring using breast cancer histopathology images", Proc. SPIE 12471, Medical Imaging 2023: Digital and Computational Pathology, 124711H (6 April 2023); https://doi.org/10.1117/12.2653989
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KEYWORDS
Image segmentation

Breast cancer

Deep learning

Color normalization

Pathology

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