Mr. Jose Dolz Profile

Jose Dolz

Marie Curie Early Stage Researcher at AQUILAB

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Proceedings Article | 21 March 2014 Paper

Combining watershed and graph cuts methods to segment organs at risk in radiotherapy

Jose Dolz, Hortense Kirisli, Romain Viard, Laurent Massoptier

Proceedings Volume 9034, 90343Z (2014) https://doi.org/10.1117/12.2042768

KEYWORDS: Image segmentation, Radiotherapy, Computed tomography, Heart, Medical imaging, Liver, Image processing algorithms and systems, Spleen, Radiation oncology, Binary data

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Computer-aided segmentation of anatomical structures in medical images is a valuable tool for efficient radiation therapy planning (RTP). As delineation errors highly affect the radiation oncology treatment, it is crucial to delineate geometric structures accurately. In this paper, a semi-automatic segmentation approach for computed tomography (CT) images, based on watershed and graph-cuts methods, is presented. The watershed pre-segmentation groups small areas of similar intensities in homogeneous labels, which are subsequently used as input for the graph-cuts algorithm. This methodology does not require of prior knowledge of the structure to be segmented; even so, it performs well with complex shapes and low intensity. The presented method also allows the user to add foreground and background strokes in any of the three standard orthogonal views – axial, sagittal or coronal - making the interaction with the algorithm easy and fast. Hence, the segmentation information is propagated within the whole volume, providing a spatially coherent result. The proposed algorithm has been evaluated using 9 CT volumes, by comparing its segmentation performance over several organs - lungs, liver, spleen, heart and aorta - to those of manual delineation from experts. A Dice´s coefficient higher than 0.89 was achieved in every case. That demonstrates that the proposed approach works well for all the anatomical structures analyzed. Due to the quality of the results, the introduction of the proposed approach in the RTP process will be a helpful tool for organs at risk (OARs) segmentation.

Proceedings Article | 21 March 2014 Paper

Interactive approach to segment organs at risk in radiotherapy treatment planning

Jose Dolz, Hortense Kirisli, Romain Viard, Laurent Massoptier

Proceedings Volume 9034, 90343S (2014) https://doi.org/10.1117/12.2042766

KEYWORDS: Image segmentation, Radiotherapy, Liver, Computed tomography, Kidney, Spleen, Heart, Image processing algorithms and systems, Lung, Medical imaging

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Accurate delineation of organs at risk (OAR) is required for radiation treatment planning (RTP). However, it is a very time consuming and tedious task. The use in clinic of image guided radiation therapy (IGRT) becomes more and more popular, thus increasing the need of (semi-)automatic methods for delineation of the OAR. In this work, an interactive segmentation approach to delineate OAR is proposed and validated. The method is based on the combination of watershed transformation, which groups small areas of similar intensities in homogeneous labels, and graph cuts approach, which uses these labels to create the graph. Segmentation information can be added in any view – axial, sagittal or coronal -, making the interaction with the algorithm easy and fast. Subsequently, this information is propagated within the whole volume, providing a spatially coherent result. Manual delineations made by experts of 6 OAR - lungs, kidneys, liver, spleen, heart and aorta – over a set of 9 computed tomography (CT) scans were used as reference standard to validate the proposed approach. With a maximum of 4 interactions, a Dice similarity coefficient (DSC) higher than 0.87 was obtained, which demonstrates that, with the proposed segmentation approach, only few interactions are required to achieve similar results as the ones obtained manually. The integration of this method in the RTP process may save a considerable amount of time, and reduce the annotation complexity.

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